Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DW990_08215 | Not Available | Negative | 2012175 - 2013341 | 43903.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DW990_08220 | Not Available | Negative | 2013356 - 2014177 | 29550.9 |
| had family hydrolase | DW990_08225 | Not Available | Negative | 2014230 - 2014880 | 24636.3 |
| mate family efflux transporter | DW990_08230 | Not Available | Positive | 2014970 - 2016322 | 49414.7 |
| potassium/proton antiporter | DW990_08235 | Not Available | Positive | 2016319 - 2017767 | 52867.7 |
| divalent metal cation transporter | DW990_08240 | Not Available | Negative | 2017844 - 2019097 | 45760.0 |
| hypothetical protein | DW990_08245 | Not Available | Positive | 2019200 - 2019598 | 15058.6 |
| clostripain | DW990_08250 | Not Available | Negative | 2019582 - 2020844 | 46861.6 |
| hypothetical protein | DW990_08255 | Not Available | Negative | 2020855 - 2021250 | 15100.5 |
| rna polymerase sigma factor rpod/siga | DW990_08260 | Not Available | Negative | 2021472 - 2022332 | 32805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

