Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4301 family protein | DW990_08135 | Not Available | Negative | 1989283 - 1990800 | 56801.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW990_08140 | Not Available | Positive | 1990944 - 1993157 | 84511.3 |
| duf1573 domain-containing protein | DW990_08150 | Not Available | Positive | 1993626 - 1994039 | 14899.0 |
| metallophosphoesterase | DW990_08155 | Not Available | Positive | 1994248 - 1995054 | 31228.2 |
| hypothetical protein | DW990_08160 | Not Available | Positive | 1995020 - 1995781 | 30020.0 |
| alpha/beta hydrolase | DW990_08170 | Not Available | Positive | 1997891 - 1998736 | 30943.9 |
| ferritin | DW990_08175 | Not Available | Negative | 1999188 - 1999670 | 17891.2 |
| 30s ribosomal protein s16 | DW990_08180 | Not Available | Positive | 1999877 - 2000428 | 19788.4 |
| hypothetical protein | DW990_08200 | Not Available | Positive | 2006399 - 2006725 | 12441.1 |
| energy-dependent translational throttle protein etta | DW990_08210 | Not Available | Negative | 2010449 - 2012137 | 63729.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

