Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | DW990_00720 | Not Available | Positive | 196010 - 198157 | 81953.4 |
| serine acetyltransferase | DW990_00725 | Not Available | Positive | 198458 - 199366 | 32799.2 |
| type ii toxin-antitoxin system hicb family antitoxin | DW990_00730 | Not Available | Positive | 199517 - 199708 | 7388.35 |
| rna methyltransferase | DW990_00735 | Not Available | Positive | 200220 - 201668 | 56304.4 |
| phosphoribosylamine--glycine ligase | DW990_00745 | Not Available | Positive | 203903 - 205171 | 45595.0 |
| hypothetical protein | DW990_00750 | Not Available | Positive | 205190 - 206125 | 35926.8 |
| deda family protein | DW990_00755 | Not Available | Positive | 206101 - 206568 | 17015.3 |
| hypothetical protein | DW990_00765 | Not Available | Negative | 207606 - 210614 | 110570.0 |
| helix-turn-helix domain-containing protein | DW990_00770 | Not Available | Negative | 210672 - 211169 | 19125.2 |
| zinc abc transporter substrate-binding protein | DW990_00775 | Not Available | Positive | 211843 - 212748 | 33993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

