Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | DW990_07860 | Not Available | Negative | 1928072 - 1930105 | 77701.6 |
| outer membrane protein assembly factor bamd | DW990_07865 | Not Available | Positive | 1930271 - 1931107 | 32450.3 |
| rna polymerase rpb6 | DW990_07870 | Not Available | Positive | 1931124 - 1931459 | 12965.3 |
| duf4293 family protein | DW990_07875 | Not Available | Positive | 1931708 - 1932160 | 16883.5 |
| port family protein | DW990_07880 | Not Available | Negative | 1932244 - 1932927 | 25699.9 |
| lysm peptidoglycan-binding domain-containing protein | DW990_07885 | Not Available | Negative | 1932927 - 1934735 | 68518.0 |
| excinuclease abc subunit uvra | DW990_07890 | Not Available | Positive | 1934890 - 1937718 | 105951.0 |
| cys-trna(pro) deacylase | DW990_07895 | Not Available | Positive | 1937733 - 1938218 | 17802.8 |
| duf340 domain-containing protein | DW990_07910 | Not Available | Negative | 1940664 - 1940942 | 10143.0 |
| duf4373 domain-containing protein | DW990_07915 | Not Available | Positive | 1941561 - 1942397 | 32184.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

