Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | DW990_07380 | Not Available | Negative | 1831342 - 1832133 | 29021.6 |
| n-acylglucosamine 2-epimerase | DW990_07390 | Not Available | Negative | 1833431 - 1834627 | 46212.1 |
| n-acetylneuraminate lyase | DW990_07395 | Not Available | Negative | 1834640 - 1835554 | 33910.9 |
| duf3408 domain-containing protein | DW990_07405 | Not Available | Positive | 1836096 - 1836512 | 15381.2 |
| hypothetical protein | DW990_07410 | Not Available | Positive | 1836716 - 1837393 | 25874.2 |
| duf4134 domain-containing protein | DW990_07415 | Not Available | Positive | 1837570 - 1837881 | 10735.3 |
| duf4133 domain-containing protein | DW990_07420 | Not Available | Positive | 1837922 - 1838281 | 13401.0 |
| duf3876 domain-containing protein | DW990_07435 | Not Available | Positive | 1841519 - 1841932 | 15690.7 |
| duf4141 domain-containing protein | DW990_07440 | Not Available | Positive | 1841966 - 1842604 | 23681.4 |
| conjugative transposon protein traj | DW990_07445 | Not Available | Positive | 1842608 - 1843636 | 38094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

