Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_07325 | Not Available | Negative | 1818476 - 1819054 | 23004.1 |
| sigma-70 family rna polymerase sigma factor | DW990_07330 | Not Available | Negative | 1819067 - 1819540 | 19000.9 |
| hypothetical protein | DW990_07335 | Not Available | Negative | 1819693 - 1820364 | 25596.6 |
| hypothetical protein | DW990_07340 | Not Available | Positive | 1820684 - 1820803 | 4138.87 |
| dna-binding protein | DW990_07345 | Not Available | Positive | 1820769 - 1821473 | 27090.8 |
| tolc family protein | DW990_07350 | Not Available | Negative | 1821688 - 1823067 | 51469.9 |
| efflux rnd transporter periplasmic adaptor subunit | DW990_07360 | Not Available | Negative | 1826222 - 1827289 | 39261.3 |
| arac family transcriptional regulator | DW990_07365 | Not Available | Positive | 1827466 - 1828344 | 34389.8 |
| tigr02757 family protein | DW990_07370 | Not Available | Positive | 1828410 - 1829174 | 29921.8 |
| glucosamine-6-phosphate deaminase | DW990_07375 | Not Available | Negative | 1829350 - 1831338 | 74771.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

