Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DW990_07095 | Not Available | Negative | 1753864 - 1755027 | 44460.2 |
| hypothetical protein | DW990_07110 | Not Available | Positive | 1757361 - 1757540 | 6345.58 |
| sugar o-acetyltransferase | DW990_07115 | Not Available | Negative | 1757562 - 1758137 | 20876.8 |
| hypothetical protein | DW990_07120 | Not Available | Negative | 1758152 - 1758439 | 10650.2 |
| alpha/beta hydrolase | DW990_07125 | Not Available | Negative | 1758804 - 1759673 | 32862.5 |
| xre family transcriptional regulator | DW990_07140 | Not Available | Positive | 1763121 - 1763324 | 7754.65 |
| duf262 domain-containing protein | DW990_07145 | Not Available | Positive | 1763392 - 1765131 | 68104.5 |
| dead/deah box helicase | DW990_07150 | Not Available | Positive | 1765198 - 1767900 | 102561.0 |
| sam-dependent dna methyltransferase | DW990_07155 | Not Available | Positive | 1767905 - 1769323 | 53156.6 |
| duf1016 domain-containing protein | DW990_07160 | Not Available | Positive | 1769327 - 1770457 | 43986.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

