Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DW990_06680 | Not Available | Negative | 1658727 - 1660124 | 53086.0 |
| dna-binding protein | DW990_06685 | Not Available | Positive | 1660453 - 1661133 | 25970.1 |
| rna polymerase sigma-70 factor | DW990_06690 | Not Available | Negative | 1661326 - 1661892 | 22251.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_06705 | Not Available | Positive | 1666699 - 1668501 | 69754.8 |
| fic family protein | DW990_06725 | Not Available | Positive | 1671465 - 1672466 | 38217.1 |
| hypothetical protein | DW990_06730 | Not Available | Negative | 1672657 - 1673355 | 26787.9 |
| hypothetical protein | DW990_06735 | Not Available | Positive | 1673562 - 1674461 | 33342.4 |
| glycoside hydrolase family 28 protein | DW990_06740 | Not Available | Positive | 1674827 - 1676320 | 55328.8 |
| exopolygalacturonase | DW990_06750 | Not Available | Positive | 1679525 - 1680829 | 49159.9 |
| duf4858 domain-containing protein | DW990_06755 | Not Available | Negative | 1680981 - 1681544 | 21541.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

