Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_06545 | Not Available | Negative | 1611535 - 1612695 | 43435.2 |
| pectate lyase | DW990_06550 | Not Available | Negative | 1612716 - 1614329 | 61375.3 |
| cupin domain-containing protein | DW990_06555 | Not Available | Positive | 1614518 - 1615009 | 18167.9 |
| hypothetical protein | DW990_06565 | Not Available | Negative | 1618547 - 1621093 | 95016.0 |
| glycoside hydrolase | DW990_06575 | Not Available | Negative | 1621634 - 1623622 | 75017.1 |
| tonb-dependent receptor | DW990_06585 | Not Available | Negative | 1626164 - 1629394 | 118681.0 |
| pectin esterase | DW990_06590 | Not Available | Negative | 1629612 - 1630562 | 35887.5 |
| glycoside hydrolase family 88 protein | DW990_06595 | Not Available | Negative | 1630577 - 1631806 | 47096.1 |
| pts sugar transporter subunit iic | DW990_06600 | Not Available | Positive | 1632096 - 1633487 | 49974.0 |
| mfs transporter | DW990_06610 | Not Available | Positive | 1634681 - 1636156 | 54265.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

