Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa synthetase | DW990_06360 | Not Available | Positive | 1553706 - 1555358 | 62326.4 |
| hypothetical protein | DW990_06365 | Not Available | Positive | 1555403 - 1555867 | 17273.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW990_06370 | Not Available | Negative | 1556181 - 1558151 | 73997.3 |
| aaa family atpase | DW990_06380 | Not Available | Negative | 1561522 - 1562715 | 45837.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW990_06385 | Not Available | Negative | 1562944 - 1564857 | 73201.5 |
| site-specific integrase | DW990_06395 | Not Available | Positive | 1568322 - 1569482 | 44958.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_06405 | Not Available | Positive | 1572996 - 1574492 | 56745.5 |
| tonb-dependent receptor | DW990_06410 | Not Available | Positive | 1574720 - 1577512 | 103956.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW990_06415 | Not Available | Positive | 1577541 - 1579016 | 54874.2 |
| noncanonical pyrimidine nucleotidase, yjjg family | DW990_06420 | Not Available | Negative | 1579166 - 1579855 | 26926.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

