Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM51-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3582 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW990_06100 | Not Available | Negative | 1476115 - 1476801 | 25460.4 |
| hypothetical protein | DW990_06105 | Not Available | Positive | 1476961 - 1477656 | 26719.6 |
| rna polymerase sigma-70 factor | DW990_06115 | Not Available | Positive | 1480175 - 1480750 | 22518.4 |
| duf4974 domain-containing protein | DW990_06120 | Not Available | Positive | 1480779 - 1481771 | 37996.7 |
| glycoside hydrolase family 92 protein | DW990_06125 | Not Available | Positive | 1481789 - 1484071 | 86472.6 |
| glycoside hydrolase family 92 protein | DW990_06130 | Not Available | Positive | 1484101 - 1486413 | 87838.7 |
| susc/raga family tonb-linked outer membrane protein | DW990_06140 | Not Available | Positive | 1486702 - 1490103 | 125000.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW990_06145 | Not Available | Positive | 1490127 - 1491896 | 66767.8 |
| endonuclease | DW990_06150 | Not Available | Positive | 1491940 - 1492785 | 31930.9 |
| glycoside hydrolase family 97 protein | DW990_06155 | Not Available | Positive | 1492973 - 1494988 | 75789.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

