Parabacteroides sp. AM58-2XD

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AM58-2XD is characterized as a rod-shaped bacterium that possesses flagella, indicating its motility capabilities. This species has a single replicon, which suggests a streamlined genetic organization that may influence its replication and stability under various environmental conditions. The genomic information for Parabacteroides sp. AM58-2XD is cataloged under the accession number QSDP00000000.1, which can be referenced for further genomic and taxonomic details. The presence of flagella in Parabacteroides sp. AM58-2XD might play a crucial role in its ecological interactions, as motility can facilitate colonization and nutrient acquisition within its habitat. This motile characteristic may enhance its ability to thrive in complex microbial communities, such as those found in the gastrointestinal tracts of hosts. As a member of the Parabacteroides genus, it is likely involved in various metabolic processes, potentially contributing to the degradation of complex carbohydrates and the production of short-chain fatty acids, which are important for host health. Overall, the traits of Parabacteroides sp. AM58-2XD highlight its potential significance in microbial ecology, particularly in gut environments where its motility may aid in establishing beneficial interactions with other microorganisms and the host.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AM58-2XD
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AM58-2XD AM58-2XD.Scaf264, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4115 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rida family proteinDXA15_12645Not AvailablePositive3263516 - 326389613047.8
ygiq family radical sam proteinDXA15_12655Not AvailableNegative3265650 - 326746469271.7
malate dehydrogenaseDXA15_12660Not AvailablePositive3267647 - 326864836344.9
s9 family peptidaseDXA15_12665Not AvailableNegative3268725 - 327121793406.1
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseDXA15_12675Not AvailableNegative3271804 - 327261329518.9
rna polymerase sigma factorDXA15_12680Not AvailableNegative3272858 - 327336719554.5
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseDXA15_12690Not AvailableNegative3275246 - 327655348379.1
tigr03905 family tscpd domain-containing proteinDXA15_12695Not AvailablePositive3276634 - 32768888955.94
duf4369 domain-containing proteinDXA15_12700Not AvailableNegative3276919 - 327866166994.9
dna-binding response regulatorDXA15_12705Not AvailableNegative3278735 - 327941825769.6

Displaying genes 2081 – 2090 of 4177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.