Ruminococcus sp. AM58-7XD

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM58-7XD is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which suggests a capability for motility. This species has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The accession number for this strain is QSDN00000000.1, which serves as a reference for genetic and genomic studies. The presence of flagella in Ruminococcus sp. AM58-7XD may provide insights into its ecological niche, potentially allowing it to navigate through complex microbial communities. As a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of plant materials, contributing to the breakdown of fibrous compounds in the digestive systems of ruminants. This role is significant in the context of ecosystem dynamics and nutrient cycling, as Ruminococcus species are known to play a key part in the digestion of cellulose and other polysaccharides, thereby aiding in the energy acquisition for their hosts. Overall, Ruminococcus sp. AM58-7XD exemplifies a specialized microorganism with distinct morphological and genetic characteristics that may enhance its ecological role in the digestive processes of herbivores, underscoring the importance of microbial diversity in maintaining healthy and functional ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM58-7XD
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM58-7XD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM58-7XD AM58-7XD.Scaf334, whole genome shotgun

Gene Summary

Adenine Count

1222451 bp

Thymine Count

1234022 bp

Guanine Count

857978 bp

Cytosine Count

887553 bp

Genome Length

4202004 bp

Protein-coding Genes

3320 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdate abc transporter substrate-binding proteinDXA17_15525Not AvailableNegative3319196 - 332007131346.0
molybdenum-pterin-binding proteinDXA17_15530Not AvailablePositive3320324 - 33205367160.73
helix-turn-helix domain-containing proteinDXA17_15535Not AvailablePositive3320529 - 332146734719.5
undecaprenyl-diphosphate phosphataseDXA17_15540Not AvailableNegative3321557 - 332245933694.6
carbamoyl-phosphate synthase large subunitDXA17_15545Not AvailableNegative3322672 - 3325887118222.0
carbamoyl phosphate synthase small subunitDXA17_15550Not AvailableNegative3325887 - 332696339359.2
3-deoxy-7-phosphoheptulonate synthaseDXA17_15560Not AvailableNegative3328464 - 332949538881.5
polysaccharide biosynthesis proteinDXA17_15565Not AvailableNegative3329542 - 333088549767.4
rrf2 family transcriptional regulatorDXA17_15570Not AvailablePositive3331127 - 333159716925.4
cysteine desulfurase nifsDXA17_15575Not AvailablePositive3331615 - 333279643494.3

Displaying genes 2601 – 2610 of 3404 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.