Ruminococcus sp. AM58-7XD

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM58-7XD is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which suggests a capability for motility. This species has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The accession number for this strain is QSDN00000000.1, which serves as a reference for genetic and genomic studies. The presence of flagella in Ruminococcus sp. AM58-7XD may provide insights into its ecological niche, potentially allowing it to navigate through complex microbial communities. As a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of plant materials, contributing to the breakdown of fibrous compounds in the digestive systems of ruminants. This role is significant in the context of ecosystem dynamics and nutrient cycling, as Ruminococcus species are known to play a key part in the digestion of cellulose and other polysaccharides, thereby aiding in the energy acquisition for their hosts. Overall, Ruminococcus sp. AM58-7XD exemplifies a specialized microorganism with distinct morphological and genetic characteristics that may enhance its ecological role in the digestive processes of herbivores, underscoring the importance of microbial diversity in maintaining healthy and functional ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM58-7XD
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM58-7XD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM58-7XD AM58-7XD.Scaf334, whole genome shotgun

Gene Summary

Adenine Count

1222451 bp

Thymine Count

1234022 bp

Guanine Count

857978 bp

Cytosine Count

887553 bp

Genome Length

4202004 bp

Protein-coding Genes

3320 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna replication/repair protein recfDXA17_14110Not AvailableNegative3022442 - 302353041740.4
rna-binding s4 domain-containing proteinDXA17_14115Not AvailableNegative3023535 - 30237447898.61
dna polymerase iii subunit betaDXA17_14120Not AvailableNegative3023758 - 302487342401.6
50s ribosomal protein l34DXA17_14130Not AvailablePositive3027169 - 30273035065.49
ribonuclease p protein componentDXA17_14135Not AvailablePositive3027367 - 302773814264.1
membrane protein insertion efficiency factor yiddDXA17_14140Not AvailablePositive3027710 - 30279197965.05
membrane protein insertase yidcDXA17_14145Not AvailablePositive3028007 - 302929647484.4
kh domain-containing proteinDXA17_14150Not AvailablePositive3029317 - 303025535608.0
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeDXA17_14155Not AvailablePositive3030657 - 303203050803.3
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgDXA17_14160Not AvailablePositive3032209 - 303408369739.5

Displaying genes 2371 – 2380 of 3404 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.