Ruminococcus sp. AM58-7XD

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM58-7XD is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella, which suggests a capability for motility. This species has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The accession number for this strain is QSDN00000000.1, which serves as a reference for genetic and genomic studies. The presence of flagella in Ruminococcus sp. AM58-7XD may provide insights into its ecological niche, potentially allowing it to navigate through complex microbial communities. As a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of plant materials, contributing to the breakdown of fibrous compounds in the digestive systems of ruminants. This role is significant in the context of ecosystem dynamics and nutrient cycling, as Ruminococcus species are known to play a key part in the digestion of cellulose and other polysaccharides, thereby aiding in the energy acquisition for their hosts. Overall, Ruminococcus sp. AM58-7XD exemplifies a specialized microorganism with distinct morphological and genetic characteristics that may enhance its ecological role in the digestive processes of herbivores, underscoring the importance of microbial diversity in maintaining healthy and functional ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM58-7XD
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM58-7XD
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM58-7XD AM58-7XD.Scaf334, whole genome shotgun

Gene Summary

Adenine Count

1222451 bp

Thymine Count

1234022 bp

Guanine Count

857978 bp

Cytosine Count

887553 bp

Genome Length

4202004 bp

Protein-coding Genes

3320 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate:ferredoxin (flavodoxin) oxidoreductaseDXA17_07355Not AvailablePositive1612667 - 1616203127343.0
gtra family proteinDXA17_07370Not AvailablePositive1620653 - 162107816270.5
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseDXA17_07375Not AvailablePositive1621075 - 162212737211.3
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseDXA17_07380Not AvailablePositive1622127 - 162264218992.9
adenosylcobinamide kinaseDXA17_07390Not AvailablePositive1623593 - 162397314258.2
selenium-dependent xanthine dehydrogenaseDXA17_07410Not AvailablePositive1629639 - 163222193716.1
4fe-4s dicluster domain-containing proteinDXA17_07415Not AvailablePositive1632224 - 163270616785.6
xanthine dehydrogenase molybdenum-binding subunit xdhaDXA17_07420Not AvailablePositive1633140 - 163541383372.4
xanthine dehydrogenase fad-binding subunit xdhbDXA17_07425Not AvailablePositive1635429 - 163631332029.6
(2fe-2s)-binding proteinDXA17_07430Not AvailablePositive1636310 - 163681018581.6

Displaying genes 1271 – 1280 of 3404 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.