Bacteroides caccae strain OF02-6LB

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides caccae strain OF02-6LB is a Gram-negative, anaerobic bacterium that belongs to the genus Bacteroides. This strain is characterized by its ability to thrive in environments devoid of oxygen, which is typical for many members of the Bacteroides genus, known for their role in the human gut microbiota. The anaerobic nature of B. caccae OF02-6LB suggests a metabolic adaptation that allows it to utilize fermentation pathways for energy production in the absence of oxygen. Bacteroides species, including B. caccae, are often involved in the breakdown of complex polysaccharides, contributing to the fermentation processes within the gastrointestinal tract. This metabolic capacity is significant for host digestion, as it facilitates the degradation of dietary fibers and the production of short-chain fatty acids, which are important for gut health and host metabolism. The specific traits of Bacteroides caccae strain OF02-6LB highlight its potential role in maintaining microbial diversity and stability within anaerobic environments, particularly in the human gut. Understanding the functional capacities of this strain may provide insights into its contributions to gut health and its interactions with other microbial communities. Further research could elucidate the precise mechanisms by which B. caccae OF02-6LB influences host-microbe interactions, emphasizing the importance of anaerobic bacteria in overall microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caccae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; intestinal
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Bacteroides caccae strain OF02-6LB

Accession NumberQSCS00000000.1

Gene Summary

Adenine Count

1545844 bp

Thymine Count

1526637 bp

Guanine Count

1126790 bp

Cytosine Count

1158772 bp

Genome Length

5358345 bp

Protein-coding Genes

4307 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
mfs transporterDXA49_00115Not Available+28123 - 2971860760.9
hypothetical proteinDXA49_00120Not Available+29886 - 3246898551.9
altronate dehydrataseDXA49_00125Not Available-32556 - 3404654233.0
laci family dna-binding transcriptional regulatorDXA49_00130Not Available-34078 - 3514240712.6
sugar kinaseDXA49_00135Not Available+35395 - 3642037261.1
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDXA49_00140Not Available+36471 - 3713923901.1
hypothetical proteinDXA49_00145Not Available-37329 - 375899652.68
duf2149 domain-containing proteinDXA49_00150Not Available-37877 - 3820312332.8
mota/tolq/exbb proton channel family proteinDXA49_00155Not Available-38200 - 3881422463.9
hypothetical proteinDXA49_00160Not Available-38849 - 3955026088.9

Displaying genes 41 – 50 of 4389 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites