Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain OF04-10BH
Accession NumberQSCE00000000.1
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DXA69_00300 | Not Available | - | 85316 - 88717 | 125018.0 |
| hypothetical protein | DXA69_00305 | Not Available | - | 88744 - 88995 | 9922.02 |
| glycoside hydrolase family 92 protein | DXA69_00310 | Not Available | - | 89006 - 91318 | 87861.9 |
| glycoside hydrolase family 92 protein | DXA69_00315 | Not Available | - | 91349 - 93631 | 86395.7 |
| duf4974 domain-containing protein | DXA69_00320 | Not Available | - | 93649 - 94641 | 37909.4 |
| rna polymerase sigma-70 factor | DXA69_00325 | Not Available | - | 94670 - 95245 | 22590.4 |
| glycoside hydrolase family 92 protein | DXA69_00330 | Not Available | - | 95442 - 97664 | 83710.1 |
| hypothetical protein | DXA69_00335 | Not Available | - | 97758 - 98453 | 26746.7 |
| atp-dependent clp protease adaptor clps | DXA69_00340 | Not Available | + | 98926 - 99234 | 12013.5 |
| aaa family atpase | DXA69_00345 | Not Available | + | 99252 - 101489 | 83395.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
