Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family peptidase | DXA69_03450 | Not Available | Positive | 890808 - 892850 | 77780.2 |
| duf4847 domain-containing protein | DXA69_03455 | Not Available | Positive | 892864 - 893358 | 18503.7 |
| cmp deaminase | DXA69_03460 | Not Available | Positive | 893363 - 893797 | 16211.4 |
| s41 family peptidase | DXA69_03465 | Not Available | Positive | 893812 - 895560 | 64827.6 |
| 5-formyltetrahydrofolate cyclo-ligase | DXA69_03470 | Not Available | Positive | 895484 - 896014 | 20393.5 |
| duf721 domain-containing protein | DXA69_03475 | Not Available | Negative | 896187 - 896477 | 11239.9 |
| dna replication and repair protein recf | DXA69_03480 | Not Available | Negative | 896474 - 897589 | 42992.6 |
| hypothetical protein | DXA69_03485 | Not Available | Positive | 897742 - 898419 | 24522.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | DXA69_03490 | Not Available | Positive | 898518 - 899024 | 18015.5 |
| Trna-tyr | Not Available | Not Available | Positive | 899136 - 899221 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

