Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod/siga | DXA69_02620 | Not Available | Negative | 686070 - 686930 | 32805.3 |
| do family serine endopeptidase | DXA69_02625 | Not Available | Negative | 687436 - 688959 | 53867.6 |
| duf417 domain-containing protein | DXA69_02630 | Not Available | Negative | 689280 - 689870 | 21415.5 |
| helix-turn-helix domain-containing protein | DXA69_02635 | Not Available | Negative | 689963 - 690799 | 32672.3 |
| response regulator | DXA69_02640 | Not Available | Positive | 691115 - 694252 | 119965.0 |
| hypothetical protein | DXA69_02645 | Not Available | Negative | 694714 - 696054 | 49812.6 |
| glycoside hydrolase family 28 protein | DXA69_02650 | Not Available | Negative | 696063 - 697394 | 49445.6 |
| hydrolase | DXA69_02655 | Not Available | Negative | 697461 - 700217 | 104217.0 |
| six-hairpin glycosidase | DXA69_02660 | Not Available | Negative | 700269 - 703580 | 126734.0 |
| hypothetical protein | DXA69_02665 | Not Available | Positive | 703616 - 703825 | 8274.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

