Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | DXA69_02320 | Not Available | Positive | 614073 - 614915 | 30710.2 |
| ll-diaminopimelate aminotransferase | DXA69_02325 | Not Available | Positive | 614962 - 616191 | 45797.8 |
| hypothetical protein | DXA69_02330 | Not Available | Positive | 616291 - 617016 | 25982.1 |
| transcriptional regulator | DXA69_02335 | Not Available | Positive | 617108 - 617464 | 13522.4 |
| ammonium transporter | DXA69_02340 | Not Available | Positive | 617534 - 618931 | 50044.3 |
| glutamine synthetase type iii | DXA69_02345 | Not Available | Positive | 619009 - 621198 | 82284.0 |
| atp-dependent dethiobiotin synthetase biod | DXA69_02350 | Not Available | Negative | 621315 - 621959 | 24299.9 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DXA69_02355 | Not Available | Negative | 621974 - 622729 | 28879.0 |
| duf452 family protein | DXA69_02360 | Not Available | Negative | 622741 - 623394 | 25049.2 |
| 8-amino-7-oxononanoate synthase | DXA69_02365 | Not Available | Negative | 623391 - 624542 | 43084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

