Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA69_22680 | Not Available | Negative | 5380082 - 5380786 | 26719.0 |
| hth domain-containing protein | DXA69_22685 | Not Available | Negative | 5380797 - 5382368 | 59453.8 |
| site-specific integrase | DXA69_22690 | Not Available | Positive | 5382849 - 5383784 | 36359.0 |
| upxy family transcription antiterminator | DXA69_22695 | Not Available | Positive | 5384081 - 5384731 | 24635.1 |
| hypothetical protein | DXA69_22700 | Not Available | Positive | 5384750 - 5385184 | 16553.6 |
| polysaccharide export protein | DXA69_22705 | Not Available | Positive | 5385210 - 5386010 | 29370.8 |
| tyrosine protein kinase | DXA69_22710 | Not Available | Positive | 5386048 - 5388477 | 90646.6 |
| flippase | DXA69_22715 | Not Available | Positive | 5388615 - 5389940 | 50090.1 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_22730 | Not Available | Positive | 5393797 - 5395782 | 74171.0 |
| tonb-dependent receptor | DXA69_22735 | Not Available | Positive | 5396222 - 5399542 | 122804.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

