Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4099 domain-containing protein | DXA69_21805 | Not Available | Negative | 5212581 - 5214158 | 60048.1 |
| dna-binding protein | DXA69_21810 | Not Available | Negative | 5214178 - 5214528 | 13869.8 |
| dna-binding protein | DXA69_21815 | Not Available | Negative | 5214532 - 5214924 | 14811.0 |
| dna-binding protein | DXA69_21820 | Not Available | Positive | 5215175 - 5215468 | 11277.9 |
| dna-binding protein | DXA69_21825 | Not Available | Positive | 5215508 - 5215813 | 11924.4 |
| rhum protein | DXA69_21830 | Not Available | Negative | 5215893 - 5216255 | 13607.6 |
| site-specific integrase | DXA69_21835 | Not Available | Negative | 5216267 - 5217502 | 47932.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | DXA69_21845 | Not Available | Negative | 5218586 - 5220352 | 65765.0 |
| lipopolysaccharide biosynthesis protein | DXA69_21850 | Not Available | Negative | 5220483 - 5221595 | 43438.0 |
| glycosyl hydrolase | DXA69_21855 | Not Available | Negative | 5221597 - 5222676 | 43161.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

