Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DXA69_20765 | Not Available | Positive | 5004856 - 5006529 | 62947.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DXA69_20770 | Not Available | Positive | 5006529 - 5007350 | 30338.5 |
| mmcq/yjbr family dna-binding protein | DXA69_20775 | Not Available | Positive | 5007371 - 5007754 | 14976.9 |
| o-succinylbenzoate synthase | DXA69_20780 | Not Available | Positive | 5007733 - 5008788 | 39882.0 |
| o-succinylbenzoic acid--coa ligase | DXA69_20785 | Not Available | Positive | 5008785 - 5009870 | 40546.3 |
| arac family transcriptional regulator | DXA69_20790 | Not Available | Positive | 5010126 - 5011013 | 34472.4 |
| duf4250 domain-containing protein | DXA69_20795 | Not Available | Negative | 5011076 - 5011252 | 6922.4 |
| atp-dependent helicase | DXA69_20800 | Not Available | Negative | 5011367 - 5013646 | 86421.2 |
| hypothetical protein | DXA69_20805 | Not Available | Negative | 5013702 - 5014169 | 17041.3 |
| virulence protein e | DXA69_20810 | Not Available | Positive | 5014355 - 5014924 | 21575.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

