Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii crispr-associated endonuclease cas1 | DXA69_20715 | Not Available | Negative | 4988511 - 4989443 | 35024.7 |
| cell filamentation protein fic | DXA69_20720 | Not Available | Negative | 4989470 - 4990468 | 38488.0 |
| type ii crispr rna-guided endonuclease cas9 | DXA69_20725 | Not Available | Negative | 4990483 - 4994997 | 175688.0 |
| clc family h(+)/cl(-) exchange transporter | DXA69_20730 | Not Available | Negative | 4995182 - 4996780 | 59662.0 |
| marr family transcriptional regulator | DXA69_20735 | Not Available | Negative | 4996813 - 4997142 | 12189.8 |
| pyridine nucleotide-disulfide oxidoreductase | DXA69_20740 | Not Available | Negative | 4997176 - 4999677 | 90679.6 |
| mate family efflux transporter | DXA69_20745 | Not Available | Positive | 4999914 - 5001269 | 49626.2 |
| slc13 family permease | DXA69_20750 | Not Available | Negative | 5001232 - 5003094 | 67149.1 |
| hotdog fold thioesterase | DXA69_20755 | Not Available | Positive | 5003283 - 5003690 | 14540.6 |
| isochorismate synthase | DXA69_20760 | Not Available | Positive | 5003687 - 5004856 | 44347.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

