Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | DXA69_01965 | Not Available | Negative | 525566 - 526120 | 21450.0 |
| pectate lyase | DXA69_01970 | Not Available | Negative | 526307 - 529393 | 115844.0 |
| polysaccharide lyase | DXA69_01975 | Not Available | Negative | 529395 - 531077 | 61305.7 |
| duf3826 domain-containing protein | DXA69_01980 | Not Available | Negative | 531277 - 531945 | 25200.6 |
| polysaccharide lyase | DXA69_01985 | Not Available | Negative | 531970 - 533703 | 64423.8 |
| hypothetical protein | DXA69_01990 | Not Available | Positive | 533743 - 533958 | 8761.92 |
| hypothetical protein | DXA69_01995 | Not Available | Negative | 534069 - 535763 | 62295.3 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_02000 | Not Available | Negative | 535921 - 537942 | 76312.5 |
| tonb-dependent receptor | DXA69_02005 | Not Available | Negative | 537951 - 541268 | 123184.0 |
| sugar phosphate isomerase/epimerase | DXA69_02010 | Not Available | Negative | 541298 - 542182 | 33352.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

