Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain OF04-10BH
Accession NumberQSCE00000000.1
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase | DXA69_00155 | Not Available | + | 44711 - 45967 | 47564.5 |
| l-rhamnose/proton symporter rhat | DXA69_00160 | Not Available | + | 46061 - 47080 | 35982.0 |
| rhamnulose-1-phosphate aldolase | DXA69_00165 | Not Available | + | 47166 - 47975 | 30228.7 |
| duf4251 domain-containing protein | DXA69_00170 | Not Available | + | 48334 - 48831 | 18505.0 |
| right-handed parallel beta-helix repeat-containing protein | DXA69_00175 | Not Available | - | 48932 - 50446 | 55807.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_00180 | Not Available | - | 50614 - 52233 | 60061.5 |
| tonb-dependent receptor | DXA69_00185 | Not Available | - | 52245 - 55316 | 114382.0 |
| hybrid sensor histidine kinase/response regulator | DXA69_00190 | Not Available | - | 55457 - 59617 | 158165.0 |
| arac family transcriptional regulator | DXA69_00195 | Not Available | + | 59764 - 60684 | 35152.7 |
| lytic transglycosylase domain-containing protein | DXA69_00200 | Not Available | + | 60692 - 61690 | 37374.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
