Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DXA69_20565 | Not Available | Negative | 4957763 - 4958881 | 42286.8 |
| histidinol-phosphate transaminase | DXA69_20570 | Not Available | Negative | 4958885 - 4959925 | 39609.4 |
| histidinol dehydrogenase | DXA69_20575 | Not Available | Negative | 4959928 - 4961208 | 46543.3 |
| atp phosphoribosyltransferase | DXA69_20580 | Not Available | Negative | 4961258 - 4962109 | 31307.3 |
| paai family thioesterase | DXA69_20585 | Not Available | Negative | 4962339 - 4962830 | 18778.8 |
| dabb family protein | DXA69_20590 | Not Available | Negative | 4962841 - 4963140 | 11114.5 |
| uridine kinase | DXA69_20595 | Not Available | Positive | 4963247 - 4963858 | 23296.4 |
| lytic transglycosylase f | DXA69_20600 | Not Available | Positive | 4963855 - 4965234 | 51989.1 |
| hypothetical protein | DXA69_20605 | Not Available | Negative | 4965522 - 4965710 | 6785.01 |
| hypothetical protein | DXA69_20610 | Not Available | Positive | 4965736 - 4966026 | 10858.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

