Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DXA69_20515 | Not Available | Positive | 4949297 - 4949770 | 18413.6 |
| endonuclease | DXA69_20520 | Not Available | Negative | 4949846 - 4950856 | 38222.8 |
| aminoacyl-histidine dipeptidase | DXA69_20525 | Not Available | Negative | 4950862 - 4952319 | 53162.8 |
| hypothetical protein | DXA69_20530 | Not Available | Positive | 4952541 - 4952768 | 8203.17 |
| omph family outer membrane protein | DXA69_20535 | Not Available | Positive | 4952791 - 4953402 | 23015.2 |
| thioredoxin | DXA69_20540 | Not Available | Positive | 4953675 - 4953971 | 11317.0 |
| thioredoxin | DXA69_20545 | Not Available | Positive | 4953975 - 4954433 | 17119.0 |
| nadh peroxidase | DXA69_20550 | Not Available | Negative | 4954537 - 4955088 | 20566.4 |
| transcriptional repressor | DXA69_20555 | Not Available | Negative | 4955153 - 4955575 | 16089.5 |
| nad(+) synthase | DXA69_20560 | Not Available | Positive | 4955741 - 4957666 | 71067.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

