Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol dehydrogenase | DXA69_19645 | Not Available | Negative | 4733911 - 4734930 | 36804.0 |
| l-fucose:h+ symporter permease | DXA69_19650 | Not Available | Negative | 4734954 - 4736213 | 47155.0 |
| amidohydrolase | DXA69_19655 | Not Available | Negative | 4736240 - 4737163 | 35348.0 |
| aldo/keto reductase | DXA69_19660 | Not Available | Negative | 4737181 - 4738113 | 34921.6 |
| arac family transcriptional regulator | DXA69_19665 | Not Available | Negative | 4738231 - 4739091 | 33562.5 |
| alpha-l-fucosidase | DXA69_19670 | Not Available | Positive | 4739333 - 4740979 | 62692.8 |
| tonb-dependent receptor | DXA69_19675 | Not Available | Positive | 4741070 - 4744141 | 113488.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_19680 | Not Available | Positive | 4744167 - 4745855 | 63993.0 |
| l-rhamnose mutarotase | DXA69_19685 | Not Available | Positive | 4745878 - 4746261 | 15483.7 |
| Trna-leu | Not Available | Not Available | Positive | 4746553 - 4746637 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

