Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DXA69_19290 | Not Available | Positive | 4660403 - 4660768 | 14203.0 |
| aminopeptidase | DXA69_19295 | Not Available | Negative | 4660860 - 4662353 | 54953.1 |
| mate family efflux transporter | DXA69_19300 | Not Available | Positive | 4662516 - 4663865 | 49783.6 |
| adenylosuccinate lyase | DXA69_19305 | Not Available | Positive | 4663959 - 4665305 | 50974.1 |
| pseudouridine synthase | DXA69_19310 | Not Available | Positive | 4665381 - 4666838 | 55842.4 |
| asparagine--trna ligase | DXA69_19315 | Not Available | Positive | 4666861 - 4668264 | 53423.0 |
| duf4488 domain-containing protein | DXA69_19320 | Not Available | Positive | 4668426 - 4668920 | 18658.9 |
| zeta toxin | DXA69_19325 | Not Available | Positive | 4669322 - 4669897 | 21455.8 |
| hypothetical protein | DXA69_19330 | Not Available | Positive | 4669887 - 4670132 | 9071.72 |
| 50s ribosomal protein l13 | DXA69_19335 | Not Available | Positive | 4670434 - 4670895 | 17129.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

