Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXA69_19025 | Not Available | Negative | 4602137 - 4604533 | 92792.7 |
| hlyd family efflux transporter periplasmic adaptor subunit | DXA69_19030 | Not Available | Negative | 4604544 - 4605794 | 48027.2 |
| tolc family protein | DXA69_19035 | Not Available | Negative | 4605879 - 4607348 | 55930.4 |
| sel1 repeat family protein | DXA69_19040 | Not Available | Negative | 4607396 - 4608319 | 34947.7 |
| sigma-54-dependent fis family transcriptional regulator | DXA69_19045 | Not Available | Positive | 4608542 - 4609909 | 51908.1 |
| atp-binding protein | DXA69_19050 | Not Available | Positive | 4609906 - 4611237 | 50489.9 |
| Trna-pro | Not Available | Not Available | Positive | 4611392 - 4611469 | Not Available |
| hypothetical protein | DXA69_19060 | Not Available | Positive | 4611609 - 4611821 | 8232.44 |
| susc/raga family tonb-linked outer membrane protein | DXA69_19070 | Not Available | Positive | 4612375 - 4615974 | 133600.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_19075 | Not Available | Positive | 4615986 - 4617611 | 61557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

