Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DXA69_18870 | Not Available | Positive | 4566622 - 4567197 | 22265.0 |
| cobyric acid synthase | DXA69_18875 | Not Available | Positive | 4567197 - 4568687 | 55380.7 |
| pyridoxal phosphate-dependent class ii aminotransferase | DXA69_18880 | Not Available | Positive | 4568680 - 4569690 | 38704.6 |
| cobalamin biosynthesis protein cobd | DXA69_18885 | Not Available | Positive | 4569672 - 4570604 | 34307.8 |
| Trna-gly | Not Available | Not Available | Positive | 4570640 - 4570712 | Not Available |
| duf1622 domain-containing protein | DXA69_18895 | Not Available | Negative | 4570718 - 4571059 | 12567.8 |
| alpha-ribazole phosphatase | DXA69_18900 | Not Available | Negative | 4571111 - 4571641 | 19977.7 |
| adenosylcobinamide-gdp ribazoletransferase | DXA69_18905 | Not Available | Negative | 4571635 - 4572384 | 27753.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DXA69_18910 | Not Available | Negative | 4572387 - 4573424 | 37579.8 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DXA69_18915 | Not Available | Negative | 4573433 - 4573942 | 19422.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

