Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4834 family protein | DXA69_18470 | Not Available | Positive | 4468685 - 4468981 | 11342.3 |
| nucleoside deaminase | DXA69_18475 | Not Available | Negative | 4468985 - 4469419 | 15697.1 |
| hypothetical protein | DXA69_18480 | Not Available | Negative | 4469421 - 4469654 | 9401.63 |
| yran family protein | DXA69_18485 | Not Available | Positive | 4469730 - 4470095 | 14151.9 |
| mmcq/yjbr family dna-binding protein | DXA69_18490 | Not Available | Positive | 4470113 - 4470469 | 14020.0 |
| biotin--[acetyl-coa-carboxylase] ligase | DXA69_18495 | Not Available | Positive | 4470453 - 4471220 | 29318.1 |
| peptidase s41 | DXA69_18500 | Not Available | Negative | 4471217 - 4472656 | 54016.5 |
| mate family efflux transporter | DXA69_18505 | Not Available | Positive | 4472813 - 4474138 | 48947.7 |
| ump kinase | DXA69_18510 | Not Available | Positive | 4474177 - 4474887 | 25575.2 |
| glycoside hydrolase family 88 protein | DXA69_18515 | Not Available | Positive | 4475145 - 4476383 | 47110.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

