Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase | DXA69_18110 | Not Available | Positive | 4388515 - 4390131 | 58753.4 |
| indolepyruvate oxidoreductase subunit beta | DXA69_18115 | Not Available | Positive | 4390128 - 4390709 | 21305.8 |
| pyridoxal phosphate-dependent aminotransferase | DXA69_18120 | Not Available | Positive | 4390714 - 4392018 | 48700.4 |
| phenylacetate--coa ligase family protein | DXA69_18125 | Not Available | Positive | 4392113 - 4393414 | 48607.6 |
| amino acid-binding protein | DXA69_18130 | Not Available | Positive | 4393428 - 4393844 | 15368.8 |
| sodium-translocating pyrophosphatase | DXA69_18135 | Not Available | Negative | 4393969 - 4396173 | 77027.6 |
| ygiq family radical sam protein | DXA69_18140 | Not Available | Negative | 4396440 - 4398317 | 71664.5 |
| hypothetical protein | DXA69_18145 | Not Available | Negative | 4398359 - 4398676 | 12230.6 |
| xanthan lyase | DXA69_18150 | Not Available | Negative | 4398767 - 4401637 | 106887.0 |
| alpha-1,3-galactosidase b | DXA69_18155 | Not Available | Positive | 4401720 - 4403537 | 68835.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

