Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXA69_17860 | Not Available | Positive | 4321441 - 4324485 | 114018.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_17865 | Not Available | Positive | 4324512 - 4326131 | 61293.8 |
| hypothetical protein | DXA69_17870 | Not Available | Positive | 4326272 - 4329628 | 126609.0 |
| hybrid sensor histidine kinase/response regulator | DXA69_17875 | Not Available | Positive | 4329768 - 4333754 | 150456.0 |
| rubrerythrin family protein | DXA69_17880 | Not Available | Negative | 4333848 - 4334426 | 21626.4 |
| duf4884 domain-containing protein | DXA69_17885 | Not Available | Positive | 4334608 - 4334877 | 10141.0 |
| stas domain-containing protein | DXA69_17890 | Not Available | Positive | 4334976 - 4336658 | 60586.7 |
| tolc family protein | DXA69_17895 | Not Available | Negative | 4336755 - 4338074 | 50372.1 |
| peptidase domain-containing abc transporter | DXA69_17900 | Not Available | Negative | 4338087 - 4340261 | 81298.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | DXA69_17905 | Not Available | Negative | 4340288 - 4341454 | 44769.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

