Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | DXA69_17705 | Not Available | Positive | 4269614 - 4270225 | 24599.9 |
| beta-glucosidase | DXA69_17710 | Not Available | Negative | 4270249 - 4271607 | 50939.3 |
| beta-glucosidase bglx | DXA69_17715 | Not Available | Negative | 4271625 - 4273940 | 84712.8 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_17720 | Not Available | Negative | 4274022 - 4275545 | 57178.1 |
| tonb-dependent receptor | DXA69_17725 | Not Available | Negative | 4275552 - 4278590 | 111915.0 |
| duf4861 domain-containing protein | DXA69_17730 | Not Available | Negative | 4278767 - 4279939 | 42934.5 |
| gluconate 5-dehydrogenase | DXA69_17735 | Not Available | Negative | 4280036 - 4280839 | 28590.5 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DXA69_17740 | Not Available | Negative | 4280876 - 4281718 | 31652.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DXA69_17745 | Not Available | Negative | 4281889 - 4283289 | 52288.6 |
| dihydrolipoyl dehydrogenase | DXA69_17750 | Not Available | Negative | 4283289 - 4284629 | 47739.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

