Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 39 protein | DXA69_17555 | Not Available | Positive | 4227637 - 4229361 | 65354.1 |
| alkaline phosphatase family protein | DXA69_17560 | Not Available | Negative | 4229445 - 4231271 | 68137.4 |
| ribonuclease h | DXA69_17565 | Not Available | Negative | 4231287 - 4231913 | 23900.6 |
| arginine--trna ligase | DXA69_17570 | Not Available | Negative | 4231914 - 4233734 | 68029.7 |
| tonb-dependent receptor | DXA69_17575 | Not Available | Positive | 4234428 - 4237514 | 114134.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_17580 | Not Available | Positive | 4237530 - 4239080 | 58666.8 |
| u32 family peptidase | DXA69_17585 | Not Available | Negative | 4239231 - 4240493 | 47014.9 |
| trna dihydrouridine synthase dusb | DXA69_17590 | Not Available | Positive | 4240644 - 4241633 | 37213.5 |
| duf2807 domain-containing protein | DXA69_17595 | Not Available | Negative | 4241729 - 4242580 | 29141.2 |
| phosphatase pap2 family protein | DXA69_17600 | Not Available | Negative | 4242757 - 4243734 | 37776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

