Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXA69_17455 | Not Available | Negative | 4200079 - 4203300 | 117046.0 |
| xylanase | DXA69_17460 | Not Available | Positive | 4203582 - 4204967 | 51212.6 |
| hybrid sensor histidine kinase/response regulator | DXA69_17465 | Not Available | Positive | 4205100 - 4209032 | 149359.0 |
| rna-binding protein | DXA69_17470 | Not Available | Positive | 4209298 - 4209543 | 9129.97 |
| threonine/serine exporter family protein | DXA69_17475 | Not Available | Negative | 4209648 - 4210994 | 50203.2 |
| pasta domain-containing protein | DXA69_17480 | Not Available | Positive | 4211144 - 4211785 | 23480.0 |
| rlua family pseudouridine synthase | DXA69_17485 | Not Available | Positive | 4211804 - 4212877 | 40888.8 |
| d-alanine--d-alanine ligase | DXA69_17490 | Not Available | Positive | 4212874 - 4213848 | 36103.2 |
| acyltransferase | DXA69_17495 | Not Available | Positive | 4213952 - 4215109 | 44600.7 |
| hypothetical protein | DXA69_17500 | Not Available | Positive | 4215168 - 4215818 | 24839.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

