Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | DXA69_17255 | Not Available | Negative | 4135370 - 4135930 | 22126.4 |
| helicase | DXA69_17260 | Not Available | Positive | 4136134 - 4138647 | 97120.2 |
| tonb-dependent receptor | DXA69_17265 | Not Available | Positive | 4139162 - 4142233 | 113238.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_17270 | Not Available | Positive | 4142246 - 4143799 | 58367.6 |
| glycoside hydrolase | DXA69_17275 | Not Available | Negative | 4143919 - 4144920 | 37760.4 |
| beta-glucanase | DXA69_17280 | Not Available | Negative | 4145246 - 4146388 | 42611.4 |
| beta-xylosidase | DXA69_17285 | Not Available | Negative | 4146414 - 4148870 | 94029.7 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_17290 | Not Available | Negative | 4149150 - 4150841 | 62940.1 |
| tonb-dependent receptor | DXA69_17295 | Not Available | Negative | 4150855 - 4153956 | 114602.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_17300 | Not Available | Negative | 4154358 - 4156382 | 76829.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

