Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | DXA69_16650 | Not Available | Negative | 3990979 - 3992331 | 49775.0 |
| chorismate synthase | DXA69_16655 | Not Available | Negative | 3992345 - 3993421 | 39086.7 |
| lema family protein | DXA69_16660 | Not Available | Negative | 3993628 - 3994209 | 21752.9 |
| tpm domain-containing protein | DXA69_16665 | Not Available | Negative | 3994246 - 3995166 | 33458.2 |
| alpha/beta hydrolase | DXA69_16670 | Not Available | Negative | 3995163 - 3996113 | 36616.4 |
| shikimate dehydrogenase | DXA69_16675 | Not Available | Negative | 3996121 - 3996861 | 27737.7 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DXA69_16680 | Not Available | Negative | 3996880 - 3997617 | 27935.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DXA69_16685 | Not Available | Negative | 3997714 - 3998658 | 35902.1 |
| phoh family protein | DXA69_16690 | Not Available | Negative | 3998679 - 3999683 | 37722.5 |
| hypothetical protein | DXA69_16695 | Not Available | Positive | 3999841 - 4000515 | 24792.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

