Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | DXA69_16235 | Not Available | Positive | 3901590 - 3902867 | 49507.3 |
| rna polymerase sigma-70 factor | DXA69_16240 | Not Available | Positive | 3902919 - 3903470 | 22013.7 |
| anti-sigma factor | DXA69_16245 | Not Available | Positive | 3903467 - 3904321 | 32318.8 |
| carboxypeptidase-like regulatory domain-containing protein | DXA69_16250 | Not Available | Positive | 3904331 - 3905887 | 60093.7 |
| Trna-ile | Not Available | Not Available | Positive | 3908841 - 3908917 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3908930 - 3909003 | Not Available |
| 2-isopropylmalate synthase | DXA69_16280 | Not Available | Positive | 3912816 - 3914312 | 54431.0 |
| 3-isopropylmalate dehydratase large subunit | DXA69_16285 | Not Available | Positive | 3914324 - 3915706 | 50113.1 |
| 3-isopropylmalate dehydratase small subunit | DXA69_16290 | Not Available | Positive | 3915720 - 3916316 | 22389.5 |
| 2-isopropylmalate synthase | DXA69_16295 | Not Available | Positive | 3916322 - 3917830 | 56454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

