Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain OF04-10BH
Accession NumberQSCE00000000.1
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA69_01360 | Not Available | - | 361868 - 362356 | 18427.7 |
| hypothetical protein | DXA69_01365 | Not Available | - | 362388 - 362867 | 17978.4 |
| radical sam/spasm domain-containing protein | DXA69_01370 | Not Available | - | 362879 - 363961 | 41750.3 |
| hypothetical protein | DXA69_01375 | Not Available | + | 363875 - 364063 | 7393.01 |
| methionine--trna ligase | DXA69_01380 | Not Available | + | 364194 - 366236 | 77779.0 |
| lipopolysaccharide biosynthesis protein | DXA69_01385 | Not Available | + | 366318 - 367754 | 53494.3 |
| acyltransferase | DXA69_01390 | Not Available | + | 367754 - 368779 | 39456.2 |
| glycosyl transferase | DXA69_01395 | Not Available | - | 368802 - 369632 | 31943.4 |
| sdr family nad(p)-dependent oxidoreductase | DXA69_01400 | Not Available | + | 369724 - 371091 | 50844.2 |
| licd family protein | DXA69_01405 | Not Available | + | 371088 - 371903 | 31469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
