Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4982 domain-containing protein | DXA69_13840 | Not Available | Negative | 3399121 - 3402126 | 114627.0 |
| glycoside hydrolase family 2 protein | DXA69_13845 | Not Available | Negative | 3402332 - 3405187 | 106544.0 |
| duf4976 domain-containing protein | DXA69_13850 | Not Available | Negative | 3405201 - 3406595 | 51682.5 |
| oligogalacturonide lyase | DXA69_13855 | Not Available | Negative | 3406609 - 3407934 | 49992.5 |
| polysaccharide deacetylase family protein | DXA69_13860 | Not Available | Negative | 3408028 - 3409005 | 37263.8 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_13865 | Not Available | Negative | 3409263 - 3411575 | 86082.9 |
| susc/raga family tonb-linked outer membrane protein | DXA69_13870 | Not Available | Negative | 3411599 - 3414630 | 112094.0 |
| pas domain-containing sensor histidine kinase | DXA69_13875 | Not Available | Negative | 3414723 - 3416192 | 55134.2 |
| sensor protein kdpd | DXA69_13880 | Not Available | Negative | 3416205 - 3417332 | 42569.0 |
| duf5131 family protein | DXA69_13885 | Not Available | Negative | 3417514 - 3418281 | 30041.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

