Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA69_13785 | Not Available | Negative | 3377550 - 3379667 | 81175.0 |
| hypothetical protein | DXA69_13790 | Not Available | Negative | 3379724 - 3381964 | 84367.9 |
| pectate lyase | DXA69_13795 | Not Available | Negative | 3381973 - 3383481 | 57108.4 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_13800 | Not Available | Negative | 3383574 - 3385451 | 70190.4 |
| susc/raga family tonb-linked outer membrane protein | DXA69_13805 | Not Available | Negative | 3385470 - 3389009 | 130916.0 |
| fecr family protein | DXA69_13810 | Not Available | Negative | 3389127 - 3390146 | 39104.9 |
| rna polymerase sigma-70 factor | DXA69_13815 | Not Available | Positive | 3390283 - 3390864 | 23103.8 |
| hypothetical protein | DXA69_13825 | Not Available | Negative | 3392061 - 3395357 | 124901.0 |
| rhamnogalacturonan acetylesterase | DXA69_13830 | Not Available | Negative | 3395379 - 3396935 | 58049.5 |
| rhamnogalacturonan lyase | DXA69_13835 | Not Available | Negative | 3397170 - 3398996 | 66980.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

