Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain OF04-10BH
Accession NumberQSCE00000000.1
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recx family transcriptional regulator | DXA69_01260 | Not Available | - | 341103 - 341588 | 18844.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | DXA69_01265 | Not Available | - | 341590 - 342426 | 31727.3 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DXA69_01270 | Not Available | + | 342471 - 343538 | 40275.2 |
| hypothetical protein | DXA69_01275 | Not Available | + | 343651 - 345048 | 52235.9 |
| isoprenyl transferase | DXA69_01280 | Not Available | + | 345082 - 345813 | 28131.5 |
| outer membrane protein assembly factor bama | DXA69_01285 | Not Available | + | 345825 - 348464 | 100661.0 |
| omph family outer membrane protein | DXA69_01290 | Not Available | + | 348485 - 349000 | 18967.6 |
| omph family outer membrane protein | DXA69_01295 | Not Available | + | 349058 - 349561 | 19288.3 |
| glutamate racemase | DXA69_01300 | Not Available | + | 349664 - 350509 | 31328.9 |
| pyridoxamine kinase | DXA69_01305 | Not Available | + | 350566 - 351438 | 32875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
