Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXA69_12545 | Not Available | Positive | 3032737 - 3032934 | 8071.13 |
| hybrid sensor histidine kinase/response regulator | DXA69_12550 | Not Available | Positive | 3033134 - 3037117 | 152512.0 |
| duf4982 domain-containing protein | DXA69_12555 | Not Available | Positive | 3037260 - 3039698 | 92793.8 |
| tonb-dependent receptor | DXA69_12560 | Not Available | Positive | 3039732 - 3042785 | 114120.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_12565 | Not Available | Positive | 3042800 - 3044581 | 68801.7 |
| protease | DXA69_12570 | Not Available | Negative | 3044644 - 3047868 | 120672.0 |
| rna polymerase sigma-70 factor | DXA69_12575 | Not Available | Positive | 3048047 - 3048634 | 22777.2 |
| fecr family protein | DXA69_12580 | Not Available | Positive | 3048723 - 3049733 | 38678.5 |
| susc/raga family tonb-linked outer membrane protein | DXA69_12585 | Not Available | Positive | 3049798 - 3053325 | 131521.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_12590 | Not Available | Positive | 3053347 - 3055269 | 73144.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

