Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain OF04-10BH
Accession NumberQSCE00000000.1
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXA69_01105 | Not Available | - | 282237 - 285563 | 123092.0 |
| helix-turn-helix domain-containing protein | DXA69_01110 | Not Available | - | 285716 - 288595 | 110764.0 |
| hypothetical protein | DXA69_01115 | Not Available | - | 288896 - 289135 | 9340.14 |
| hypothetical protein | DXA69_01120 | Not Available | - | 289216 - 291642 | 92701.2 |
| glycoside hydrolase | DXA69_01125 | Not Available | - | 291645 - 292643 | 37837.1 |
| glycoside hydrolase family 127 protein | DXA69_01130 | Not Available | - | 292648 - 295071 | 90560.3 |
| beta-xylosidase | DXA69_01140 | Not Available | - | 297511 - 299055 | 57642.0 |
| hypothetical protein | DXA69_01145 | Not Available | - | 299068 - 301137 | 78393.5 |
| glycoside hydrolase family 2 | DXA69_01150 | Not Available | - | 301263 - 303890 | 100072.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXA69_01155 | Not Available | - | 303993 - 305609 | 60190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
