Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster domain-containing protein | DXA69_11785 | Not Available | Negative | 2855656 - 2856603 | 32368.5 |
| rsec/mucc family positive regulator of sigma(e) | DXA69_11790 | Not Available | Negative | 2856624 - 2857052 | 15786.6 |
| threonine ammonia-lyase | DXA69_11795 | Not Available | Negative | 2857231 - 2858427 | 42472.5 |
| dmt family transporter | DXA69_11800 | Not Available | Negative | 2858608 - 2859528 | 33709.7 |
| mfs transporter | DXA69_11805 | Not Available | Negative | 2859560 - 2860750 | 43413.1 |
| glutamate decarboxylase | DXA69_11810 | Not Available | Positive | 2861191 - 2862639 | 54695.8 |
| glutaminase | DXA69_11815 | Not Available | Positive | 2862705 - 2863667 | 34699.8 |
| copper homeostasis protein cutc | DXA69_11820 | Not Available | Positive | 2863968 - 2864831 | 31317.4 |
| transglutaminase domain-containing protein | DXA69_11825 | Not Available | Negative | 2864922 - 2867585 | 99176.9 |
| fic family protein | DXA69_11830 | Not Available | Positive | 2867937 - 2868677 | 28535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

