Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DXA69_11630 | Not Available | Positive | 2821669 - 2822826 | 44873.6 |
| antibiotic biosynthesis monooxygenase | DXA69_11635 | Not Available | Positive | 2822875 - 2823150 | 10402.5 |
| hypothetical protein | DXA69_11640 | Not Available | Positive | 2823140 - 2823496 | 14069.2 |
| duf340 domain-containing protein | DXA69_11645 | Not Available | Positive | 2823706 - 2823993 | 10386.4 |
| lysine exporter lyso family protein | DXA69_11650 | Not Available | Positive | 2823983 - 2824603 | 22139.5 |
| abc transporter permease | DXA69_11655 | Not Available | Negative | 2824951 - 2826195 | 46920.5 |
| pyridoxal phosphate-dependent aminotransferase | DXA69_11660 | Not Available | Negative | 2826197 - 2827399 | 44955.1 |
| fucose isomerase | DXA69_11665 | Not Available | Positive | 2827565 - 2828800 | 46250.4 |
| duf4494 domain-containing protein | DXA69_11670 | Not Available | Positive | 2828896 - 2829378 | 18209.6 |
| yggs family pyridoxal phosphate-dependent enzyme | DXA69_11675 | Not Available | Positive | 2829411 - 2830079 | 25401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

