Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain OF04-10BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1595049 bp
Thymine Count
1627393 bp
Guanine Count
1165415 bp
Cytosine Count
1140111 bp
Genome Length
5528270 bp
Protein-coding Genes
4437 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 2813347 - 2813423 | Not Available |
| formyltetrahydrofolate deformylase | DXA69_11585 | Not Available | Positive | 2813688 - 2814545 | 33302.5 |
| imidazole glycerol phosphate synthase subunit hish | DXA69_11590 | Not Available | Positive | 2814545 - 2815135 | 22284.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DXA69_11595 | Not Available | Positive | 2815177 - 2815896 | 26680.4 |
| imidazole glycerol phosphate synthase subunit hisf | DXA69_11600 | Not Available | Positive | 2815906 - 2816661 | 27227.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DXA69_11605 | Not Available | Positive | 2816827 - 2817438 | 23196.7 |
| atp-binding cassette domain-containing protein | DXA69_11610 | Not Available | Positive | 2817443 - 2818198 | 28375.1 |
| aspartate kinase | DXA69_11615 | Not Available | Positive | 2818306 - 2819625 | 49326.1 |
| diaminopimelate decarboxylase | DXA69_11620 | Not Available | Positive | 2819733 - 2820893 | 42735.3 |
| hypothetical protein | DXA69_11625 | Not Available | Negative | 2820958 - 2821464 | 19744.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

